PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016433537.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 457aa    MW: 50183.9 Da    PI: 5.1789
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016433537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.5e-11387432655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L  A +YIk+L+
  XP_016433537.1 387 SIAERVRRTRISDRMRKLQDLVPNM----DKQTNTADMLDFAADYIKELE 432
                     689*********************7....688***************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.488381431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-15384444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.47E-11385436No hitNo description
Gene3DG3DSA:4.10.280.101.7E-14386444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-12387437IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-8387432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MDHRSHQQQQ MTSGLTRYRS APSSYFSSLL SSNNPTAVVS GGGNCGYARD DFDQLLNSRA  60
SNTDDVKQVF DRFVANIDPQ DLNPNNGLIG DTQQIQQNHM SNMNVRSEGV APTKQEHEQS  120
QARQSQNSQF IAAVKQETQQ NSDYSLASQM NYQTQAQQND NSDLTSAMDN FARFLGAADS  180
NRLNQTKMDG GFGAGSSNSN LTRYNSSPAG FFAQFDIENE YGAMRGIGGY GAGGNAAAEA  240
SFPTPNRFSS QTALQSGQPP SSGLLAPISV FGAKSIEEGR AGDESFGKGH KNDESYMTVF  300
PMPSWDDSQM LTDDFLQVPE DNEAEPFSNV NASDNQSSEG RARPPTLLSH LSLPQTSAEL  360
SAMEKLLQDS VPCKVRAKRG CATHPRSIAE RVRRTRISDR MRKLQDLVPN MDKQTNTADM  420
LDFAADYIKE LETQVKALSE RRSKCTCSNK IEDHIQK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754511e-110HG975451.1 Solanum pennellii chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016433537.10.0PREDICTED: transcription factor bHLH122-like
RefseqXP_016433545.10.0PREDICTED: transcription factor bHLH122-like
TrEMBLM1C7B50.0M1C7B5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000612840.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.18e-52bHLH family protein